2024

• EOSC CZ: Towards the development of Czech national ecosystem for FAIR research data

  ANTOL Matej MAREK Jiří CAPANDOVÁ Michaela JURÁČEK Jaroslav MATYSKA Luděk

  Research report

  Year: 2024

2023

• Public (Health) Sector and Academia

  ANTOL Matej RŮŽIČKA Michal MATYSKA Luděk MAREK Jiří

  Chapter of a book

  Data-Driven Decision-Making in Medical Education and Healthcare, edition: Vyd. First edition, year: 2023, number of pages: 16 s.

2020

• CaverDock: A Novel Method for the Fast Analysis of Ligand Transport

  FILIPOVIČ Jiří VÁVRA Ondřej PLHÁK Jan BEDNÁŘ David MARQUES Sérgio Manuel BREZOVSKÝ Jan MATYSKA Luděk DAMBORSKÝ Jiří

  Article in Periodical

  IEEE/ACM Transactions on Computational Biology and Bioinformatics, year: 2020, volume: 17, edition: 5, DOI

2019

• CaverDock: a molecular docking-based tool to analyse ligand transport through protein tunnels and channels

  VÁVRA Ondřej FILIPOVIČ Jiří PLHÁK Jan BEDNÁŘ David MARQUES Sérgio Manuel BREZOVSKÝ Jan ŠTOURAČ Jan MATYSKA Luděk DAMBORSKÝ Jiří

  Article in Periodical

  Bioinformatics, year: 2019, volume: 35, edition: 23, DOI

2018

• Common ELIXIR Service for Researcher Authentication and Authorisation

  LINDEN Mikael PROCHÁZKA Michal LAPPALAINEN Ilkka BUČÍK Dominik František VYSKOČIL Pavel KUBA Martin SILÉN Sami BELMANN Peter SCZYRBA Alexander NEWHOUSE Steven MATYSKA Luděk NYRÖNEN Tommi

  Article in Periodical

  F1000Research, year: 2018, volume: 7, edition: 2018, DOI

• INDIGO-DataCloud: A platform to facilitate seamless access to e-infrastructures

  SALOMONI Davide GAIDO Luciano PLASENCIA Isabel Campos LUCAS Jesus E Marco de SOLAGNA Peter GOMES Jorge MATYSKA Luděk FUHRMAN P HARDT Marcus DONVITO Giacinto DUTKA L CIENNIK Marcin Pl o BARBERA Roberto AIFTIMIEI Cristina BLANQUER Ignacio CECCANTI Andrea DAVID Mario GARCIA Alvaro Lopez MOLTO German ORVIZ P SUSTR Zdeněk VILJOEN M AGUILAR Fernando ALVES L BONVING Alexandre BRUNO Riccardo DAVIDOVIC D FARGETTA Marco CHEN Yen FIORE Sandro KURKCUOGLU Z LLORET L MARTINS J NUZZO Alessandra NASSISI Paola PINA J SCIACCA Eva SPIGA Daniele TANGARO M URBANIAK Michal WEGH Bas ZOK T

  Article in Periodical

  Journal of Grid Computing, year: 2018, volume: 16, edition: 3, DOI

2017

• CaverDock 1.0

  FILIPOVIČ Jiří VÁVRA Ondřej PLHÁK Jan BEDNÁŘ David MARQUES Sérgio Manuel BREZOVSKÝ Jan MATYSKA Luděk DAMBORSKÝ Jiří

  Software

  Year: 2017

2016

• Guided Optimization Method for Fast and Accurate Atomic Charges Computation

  PAZÚRIKOVÁ Jana KŘENEK Aleš MATYSKA Luděk

  Article in Proceedings

  Proceedings of the 2016 European Simulation and Modelling Conference, year: 2016

2015

• Optimizing CUDA code by kernel fusion: application on BLAS

  FILIPOVIČ Jiří MADZIN Matúš FOUSEK Jan MATYSKA Luděk

  Article in Periodical

  The Journal of Supercomputing, year: 2015, volume: 71, edition: 10, DOI

2014

• Convergence of Parareal Algorithm Applied on Molecular Dynamics Simulations

  PAZÚRIKOVÁ Jana MATYSKA Luděk

  Article in Proceedings

  MEMICS 2014, year: 2014