Biochemical Space: A Framework for Formal Description and Annotation of Complex Biological Processes

Publikace nespadá pod Filozofickou fakultu, ale pod Fakultu informatiky. Oficiální stránka publikace je na webu muni.cz.

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TROJÁK Matej ŠAFRÁNEK David ŠALAGOVIČ Jakub ROMANOVSKÁ Františka HAJNAL Matej

Rok publikování 2017
Druh Další prezentace na konferencích
Fakulta / Pracoviště MU

Fakulta informatiky

Citace
Popis Biochemical Space is a novel framework for practical description of complex biological processes. It is developed as a part of Comprehensive Modeling Platform - a web-based platform for modeling and analysis of biological processes. In the context of the platform, Biochemical Space binds complicated quantitative models with an easy-to-understand, yet formal and compact qualitative description. It allows us to specify formal and well-annotated reaction networks of chemical entities and elemental reactions onto which the mathematical models are projected. Biochemical Space is supported by Biochemical Space Language that combines state-of-the-art rule-based techniques with metadata formats developed in well-known annotation databases.
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